species:   Pimic
pid:       PID1830
parent:    Pmic_miR-7
paralog:   
locus:     scaffold_106:26653-26727
matures:   ['UCCAGCAAGGGGGAAUGGGCU', 'CUCGUUCCCUUUGCUGGACG']
srr:       SRX5082459
genome:    /Users/jax/+Genomes/Fungal_genomes/Pimic.Pismi1_AssemblyScaffolds.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Wong-Bajracharya2022-kz.SRX5082459.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Wong-Bajracharya2022-kz.SRX5082459.cram scaffold_106:26653-26727

0 out of bounds
5 alignments
3 proper strand
2 stranded perfect matches

                *****************           ****************               
AUUAAAAUUUGCCAAGCGUCCAGCAAGGGGGAAUGGGCUACUCGUUCCCUUUGCUGGACGCUUGGCGUCGCCCAC
..........((((((((((((((((((((.((((((...)))))))))))))))))))))))))).........
------------------UCCAGCAAGGGGGAAUGGGCU------------------------------------ l=21 a=0 c
----------------------------------------CUCGUUCCCUUUGCUGGACG--------------- l=20 a=1 c*
------------------UCCAGCAAGGGGGAAUGGGCUACUC-------------------------------- l=25 a=1 ma
----------------------------------------CUCGUUCCCUUUGCUGGACG--------------- l=20 a=1 ma*

------------------UCCAGCAAGGGGGAAUGGGCUACUC-------------------------------- l=25 a=1 (ma)
--------------------------------------UACUCGUUCCCUUUGCcGG------------------ l=19 a=1 
----------------------------------------CUCGUUCCCUUUGCUGGACG--------------- l=20 a=1 (c*,ma*)

mb-00010
ax-1011001
ku-01
ss-100010111100
fn-001
